
Robust-Regression Combined-Likelihood Inference for KK Designs
Source:R/inference_continuous_KK_robust_regr_one_lik.R
InferenceContinKKRobustRegrOneLik.RdFits a single stacked robust regression over matched-pair differences and reservoir observations for KK matching-on-the-fly designs with continuous responses.
Computes the randomization distribution of the treatment effect estimate under the sharp null.
Whether compute_rand_two_sided_pval() is actually
usable on this instance right now – FALSE exactly when it
would stop(): an incidence-response instance with no
custom randomization statistic and a design not eligible for
design-randomization-based incidence inference (see
private$should_use_design_randomization_for_incidence()).
TRUE for every other case, including every non-incidence
response type. Public, self-contained (only reads already-set
instance state, no side effects), so InferenceSuite can
check this before attempting the sentinel instead of relying on
the stop() being silently swallowed into a pval = NA
"ok" row – the single source of truth for both this check and
compute_rand_two_sided_pval()'s own guard, so the two can
never drift apart.
Computes a randomization-based p-value.
Value
When debug = FALSE (default), a numeric vector of length r. When
debug = TRUE, a list with: values, errors (list of character
vectors, one per iteration), warnings (list of character vectors, one per
iteration), num_errors, num_warnings,
prop_iterations_with_errors, prop_iterations_with_warnings, and
prop_illegal_values.
A single logical.
Randomization p-value.
Details
Model. Analogous to
InferenceContinKKOLSOneLik's single
stacked design (matched-pair difference rows plus reservoir rows fit in one
regression, treatment coefficient \(\beta_T\)), but fit with a robust
M/MM-estimator (MASS::rlm, or an internal Rcpp IRLS kernel when
use_rcpp = TRUE) instead of ordinary least squares. "MM" (the
default method) starts from an LQS-based high-breakdown fit; "M"
can warm-start from OLS (start_with_ols = TRUE).
Likelihood tier. likelihood_tier = "quasi": the robust
objective is not a normalized likelihood, so only Wald-type asymptotic
inference is available (compute_wald_confidence_interval()/
compute_wald_two_sided_pval(), aliased by the standard
compute_asymp_* names) — no score/gradient/likelihood-ratio testing
types, unlike the OLS one-likelihood sibling.
Assumptions. Continuous response; independent matched pairs and/or independent reservoir subjects; no censoring; a KK matching-on-the-fly design. Robust regression trades some efficiency under exactly-Gaussian errors for resistance to outliers and heavy tails.
References
Kapelner, A. and Krieger, A. M. (2014). Matching on-the-fly: Sequential
allocation with higher power and efficiency. Biometrics, 70(2),
378-388. doi:10.1111/biom.12148
. (KK14 in REFERENCES.md.)
See also
InferenceContinKKRobustRegrIVWC
for the inverse-variance-weighted-combination alternative to this
one-likelihood combined-fit approach. Analogous Python API:
statsmodels RLM.
Super class
Inference -> InferenceContinKKRobustRegrOneLik
Methods
+ inherited public methods from Inference
Inference$capabilities()Inference$compute_asymp_confidence_interval()Inference$compute_asymp_two_sided_pval()Inference$compute_estimate()Inference$compute_exact_confidence_interval()Inference$compute_exact_two_sided_pval_for_treatment_effect()Inference$duplicate()Inference$get_analysis_data()Inference$get_covariates()Inference$get_design_object()Inference$get_model_formula()Inference$get_nonestimable_reason()Inference$get_nonestimable_stage()Inference$get_optimization_alg()Inference$get_response()Inference$get_response_type()Inference$get_treatment()Inference$initialize()Inference$is_nonestimable()Inference$set_optimization_alg()Inference$set_seed()Inference$supports()
InferenceContinKKRobustRegrOneLik$approximate_randomization_distribution_beta_hat_T()
Usage
InferenceContinKKRobustRegrOneLik$approximate_randomization_distribution_beta_hat_T(
r = 501,
delta = 0,
transform_responses = "none",
show_progress = TRUE,
permutations = NULL,
debug = FALSE,
zero_one_logit_clamp = .Machine$double.eps
)Arguments
rNumber of randomization vectors. Default 501.
rNumber of randomization vectors.
deltaThe null difference. Default 0.
deltaNull difference.
transform_responsesType of transformation. Default "none".
transform_responsesTransformation.
show_progressShow progress bar. Default TRUE.
show_progressShow progress.
permutationsPre-computed permutations. Default NULL.
permutationsPre-computed permutations.
debugIf
TRUE, return a list with the distribution values and per-iteration diagnostics including error messages, warning messages, counts of each, and summary proportions for iterations with errors, warnings, and illegal (non-finite) values. Runs serially. DefaultFALSE.zero_one_logit_clampThe clamping amount for exact 0 and 1 values when logging
zero_one_logit_clampThe clamping amount for exact 0 and 1 values when logging
InferenceContinKKRobustRegrOneLik$compute_rand_two_sided_pval()
Usage
InferenceContinKKRobustRegrOneLik$compute_rand_two_sided_pval(
r = 501,
delta = 0,
transform_responses = "none",
na.rm = TRUE,
show_progress = TRUE,
permutations = NULL,
zero_one_logit_clamp = .Machine$double.eps
)Arguments
rNumber of randomization vectors. Default 501.
rNumber of randomization vectors.
deltaThe null difference. Default 0.
deltaNull difference.
transform_responsesType of transformation. Default "none".
transform_responsesTransformation.
na.rmRemove NAs.
show_progressShow progress bar. Default TRUE.
show_progressShow progress.
permutationsPre-computed permutations. Default NULL.
permutationsPre-computed permutations.
zero_one_logit_clampThe clamping amount for exact 0 and 1 values when logging
zero_one_logit_clampThe clamping amount for exact 0 and 1 values when logging